Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | D7004_15575 | Not Available | Positive | 3705605 - 3706648 | 41071.2 |
| glycosyltransferase family 2 protein | D7004_15580 | Not Available | Positive | 3706641 - 3707543 | 35781.0 |
| hypothetical protein | D7004_15585 | Not Available | Positive | 3707540 - 3708142 | 23096.0 |
| carbamoyltransferase | D7004_15590 | Not Available | Positive | 3708151 - 3709875 | 65082.3 |
| doxx family protein | D7004_15595 | Not Available | Positive | 3710013 - 3710462 | 16720.0 |
| efflux transporter outer membrane subunit | D7004_15600 | Not Available | Negative | 3711173 - 3712606 | 52964.4 |
| efflux rnd transporter permease subunit | D7004_15605 | Not Available | Negative | 3712599 - 3715769 | 115257.0 |
| efflux rnd transporter periplasmic adaptor subunit | D7004_15610 | Not Available | Negative | 3715793 - 3716875 | 40328.9 |
| hypothetical protein | D7004_15615 | Not Available | Positive | 3717099 - 3717326 | 8646.72 |
| cell filamentation protein fic | D7004_15620 | Not Available | Negative | 3717283 - 3718281 | 38696.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

