Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphofructokinase | D7004_15320 | Not Available | Positive | 3641668 - 3642654 | 34919.9 |
| hypothetical protein | D7004_15325 | Not Available | Positive | 3642659 - 3643501 | 31488.9 |
| type i glyceraldehyde-3-phosphate dehydrogenase | D7004_15330 | Not Available | Positive | 3643509 - 3644507 | 35537.5 |
| dicarboxylate/amino acid:cation symporter | D7004_15335 | Not Available | Negative | 3645190 - 3646458 | 45318.9 |
| cyanophycinase | D7004_15340 | Not Available | Negative | 3646513 - 3647346 | 30676.5 |
| isoaspartyl peptidase/l-asparaginase | D7004_15345 | Not Available | Negative | 3647346 - 3648371 | 36361.9 |
| abc transporter atp-binding protein | D7004_15350 | Not Available | Negative | 3648428 - 3650197 | 66636.5 |
| trna pseudouridine(38-40) synthase trua | D7004_15355 | Not Available | Negative | 3650331 - 3651086 | 28618.4 |
| duf4293 family protein | D7004_15360 | Not Available | Positive | 3651162 - 3651686 | 19591.8 |
| hypothetical protein | D7004_15365 | Not Available | Positive | 3651971 - 3652447 | 18317.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

