Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxypyruvate isomerase | D7004_15110 | Not Available | Positive | 3596857 - 3597750 | 33130.9 |
| twin-arginine translocation signal domain-containing protein | D7004_15115 | Not Available | Positive | 3597756 - 3598628 | 32542.3 |
| sugar phosphate isomerase/epimerase | D7004_15120 | Not Available | Positive | 3598641 - 3599510 | 32270.5 |
| hypothetical protein | D7004_15125 | Not Available | Positive | 3599636 - 3599869 | 8736.45 |
| type ii toxin-antitoxin system rele/pare family toxin | D7004_15130 | Not Available | Positive | 3599874 - 3600164 | 11617.2 |
| hypothetical protein | D7004_15135 | Not Available | Negative | 3600161 - 3602770 | 95714.8 |
| aspartate-semialdehyde dehydrogenase | D7004_15140 | Not Available | Positive | 3602820 - 3603809 | 36335.1 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | D7004_15145 | Not Available | Positive | 3603945 - 3605351 | 50895.6 |
| hypothetical protein | D7004_15150 | Not Available | Negative | 3605358 - 3607718 | 88103.2 |
| hypothetical protein | D7004_15155 | Not Available | Positive | 3607841 - 3608965 | 42316.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

