Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yebc/pmpr family dna-binding transcriptional regulator | D7004_15060 | Not Available | Negative | 3585792 - 3586520 | 27261.1 |
| nad-dependent epimerase/dehydratase family protein | D7004_15065 | Not Available | Negative | 3586709 - 3587656 | 35405.2 |
| gluconate 2-dehydrogenase subunit 3 family protein | D7004_15070 | Not Available | Positive | 3588133 - 3588720 | 21404.9 |
| gmc family oxidoreductase | D7004_15075 | Not Available | Positive | 3588743 - 3590446 | 64202.2 |
| gfo/idh/moca family oxidoreductase | D7004_15080 | Not Available | Positive | 3590525 - 3591682 | 42400.8 |
| sugar phosphate isomerase/epimerase | D7004_15085 | Not Available | Positive | 3591686 - 3592738 | 39519.4 |
| cytochrome c552 | D7004_15090 | Not Available | Positive | 3592827 - 3593213 | 13981.3 |
| gfo/idh/moca family oxidoreductase | D7004_15095 | Not Available | Positive | 3593243 - 3594700 | 54101.4 |
| duf1080 domain-containing protein | D7004_15100 | Not Available | Positive | 3594752 - 3595432 | 25003.7 |
| mfs transporter | D7004_15105 | Not Available | Positive | 3595618 - 3596853 | 45157.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

