Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | D7004_14960 | Not Available | Negative | 3556620 - 3557435 | 29614.8 |
| carbamoyl-phosphate synthase small subunit | D7004_14965 | Not Available | Positive | 3557801 - 3558913 | 41114.0 |
| abc transporter atp-binding protein | D7004_14970 | Not Available | Positive | 3559116 - 3559880 | 28520.4 |
| abc transporter permease | D7004_14975 | Not Available | Positive | 3560034 - 3561134 | 39966.8 |
| tetr/acrr family transcriptional regulator | D7004_14980 | Not Available | Negative | 3561368 - 3561943 | 22041.6 |
| hypothetical protein | D7004_14985 | Not Available | Negative | 3561943 - 3562350 | 14445.6 |
| phenylalanine--trna ligase subunit alpha | D7004_14990 | Not Available | Negative | 3562353 - 3563393 | 39419.0 |
| glycine c-acetyltransferase | D7004_14995 | Not Available | Negative | 3563543 - 3564730 | 43250.2 |
| carboxypeptidase-like regulatory domain-containing protein | D7004_15000 | Not Available | Positive | 3564941 - 3567388 | 93490.5 |
| hypothetical protein | D7004_15005 | Not Available | Positive | 3567339 - 3567527 | 7988.42 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

