Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase family protein | D7004_14910 | Not Available | Positive | 3548184 - 3549140 | 34441.6 |
| sigma-70 family rna polymerase sigma factor | D7004_14915 | Not Available | Positive | 3549225 - 3549785 | 21945.3 |
| hypothetical protein | D7004_14920 | Not Available | Positive | 3549819 - 3550475 | 24805.8 |
| hypothetical protein | D7004_14925 | Not Available | Positive | 3550488 - 3550919 | 17297.2 |
| aspartate aminotransferase family protein | D7004_14930 | Not Available | Positive | 3551137 - 3552267 | 41052.9 |
| dna-binding response regulator | D7004_14935 | Not Available | Positive | 3552328 - 3553005 | 26010.2 |
| sensor histidine kinase | D7004_14940 | Not Available | Positive | 3553104 - 3554411 | 49973.8 |
| hypothetical protein | D7004_14945 | Not Available | Positive | 3554527 - 3555000 | 17799.2 |
| hypothetical protein | D7004_14950 | Not Available | Negative | 3555172 - 3555597 | 15951.2 |
| rlua family pseudouridine synthase | D7004_14955 | Not Available | Negative | 3555745 - 3556431 | 26036.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

