Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4876 domain-containing protein | D7004_14760 | Not Available | Positive | 3513206 - 3514522 | 48309.1 |
| hypothetical protein | D7004_14765 | Not Available | Positive | 3514564 - 3516114 | 59360.9 |
| cytochrome-c peroxidase | D7004_14770 | Not Available | Positive | 3516119 - 3517258 | 42828.4 |
| glutamate racemase | D7004_14775 | Not Available | Negative | 3517631 - 3518449 | 30502.6 |
| omph family outer membrane protein | D7004_14780 | Not Available | Negative | 3518656 - 3519234 | 20757.8 |
| omph family outer membrane protein | D7004_14785 | Not Available | Negative | 3519292 - 3519822 | 20435.6 |
| outer membrane protein assembly factor bama | D7004_14790 | Not Available | Negative | 3519986 - 3522532 | 95389.4 |
| isoprenyl transferase | D7004_14795 | Not Available | Negative | 3522685 - 3523425 | 28314.8 |
| hypothetical protein | D7004_14800 | Not Available | Negative | 3523445 - 3524257 | 30038.3 |
| nad kinase | D7004_14805 | Not Available | Negative | 3524260 - 3525141 | 32778.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

