Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marc family protein | D7004_14710 | Not Available | Positive | 3499400 - 3499966 | 20473.1 |
| rsmb/nop family class i sam-dependent rna methyltransferase | D7004_14715 | Not Available | Negative | 3500408 - 3501574 | 44505.2 |
| amino acid abc transporter substrate-binding protein | D7004_14720 | Not Available | Negative | 3501593 - 3502810 | 46240.6 |
| glutamine-hydrolyzing gmp synthase | D7004_14725 | Not Available | Negative | 3502895 - 3504427 | 56321.4 |
| cytidine deaminase | D7004_14730 | Not Available | Negative | 3504490 - 3504948 | 16435.6 |
| mfs transporter | D7004_14735 | Not Available | Negative | 3505010 - 3506617 | 56669.3 |
| lyse family translocator | D7004_14740 | Not Available | Positive | 3506769 - 3507395 | 23064.2 |
| hypothetical protein | D7004_14745 | Not Available | Negative | 3507396 - 3508007 | 22903.6 |
| amidophosphoribosyltransferase | D7004_14750 | Not Available | Negative | 3508287 - 3510188 | 72323.5 |
| tonb-dependent receptor | D7004_14755 | Not Available | Positive | 3510365 - 3513196 | 104980.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

