Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr family transcriptional regulator | D7004_14610 | Not Available | Positive | 3479773 - 3480804 | 38949.2 |
| plasmid mobilization relaxosome protein mobc | D7004_14615 | Not Available | Positive | 3480994 - 3481329 | 12730.6 |
| relaxase/mobilization nuclease | D7004_14620 | Not Available | Positive | 3481326 - 3482492 | 44124.9 |
| xre family transcriptional regulator | D7004_14625 | Not Available | Negative | 3482564 - 3482806 | 9225.25 |
| hypothetical protein | D7004_14630 | Not Available | Positive | 3482896 - 3483114 | 8417.57 |
| hypothetical protein | D7004_14635 | Not Available | Positive | 3483117 - 3483329 | 8061.44 |
| invertase | D7004_14640 | Not Available | Negative | 3483596 - 3484192 | 22522.7 |
| dead/deah box helicase | D7004_14645 | Not Available | Negative | 3484387 - 3485694 | 48520.1 |
| hypothetical protein | D7004_14650 | Not Available | Negative | 3485740 - 3485958 | 8449.48 |
| hypothetical protein | D7004_14655 | Not Available | Positive | 3486178 - 3486651 | 17629.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

