Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4267 domain-containing protein | D7004_14395 | Not Available | Positive | 3438695 - 3439012 | 11782.3 |
| site-specific integrase | D7004_14410 | Not Available | Negative | 3440497 - 3441717 | 46343.6 |
| Trna-lys | Not Available | Not Available | Positive | 3441966 - 3442038 | Not Available |
| hypothetical protein | D7004_14420 | Not Available | Positive | 3442371 - 3442799 | 16461.2 |
| transcriptional regulator | D7004_14425 | Not Available | Negative | 3443447 - 3443806 | 13837.9 |
| tonb-dependent receptor | D7004_14430 | Not Available | Negative | 3444231 - 3446678 | 91274.6 |
| pspc domain-containing protein | D7004_14435 | Not Available | Negative | 3446744 - 3448489 | 66024.5 |
| padr family transcriptional regulator | D7004_14440 | Not Available | Negative | 3448510 - 3448845 | 12315.8 |
| amino acid permease | D7004_14445 | Not Available | Positive | 3449685 - 3451142 | 52167.0 |
| class i sam-dependent methyltransferase | D7004_14450 | Not Available | Negative | 3451527 - 3452177 | 25247.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

