Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| restriction endonuclease | D7004_14345 | Not Available | Positive | 3431680 - 3432083 | 15696.0 |
| hypothetical protein | D7004_14350 | Not Available | Negative | 3432080 - 3432388 | 11688.1 |
| type ii restriction endonuclease | D7004_14355 | Not Available | Negative | 3432465 - 3432994 | 20799.6 |
| is3 family transposase | D7004_14360 | Not Available | Negative | 3433111 - 3433902 | 30501.1 |
| hypothetical protein | D7004_14365 | Not Available | Positive | 3433960 - 3434340 | 14834.2 |
| dna-binding protein | D7004_14370 | Not Available | Negative | 3435502 - 3435750 | 9114.78 |
| hypothetical protein | D7004_14375 | Not Available | Negative | 3436219 - 3436443 | 8519.45 |
| pas domain s-box protein | D7004_14380 | Not Available | Positive | 3436564 - 3437637 | 40405.3 |
| atp-binding protein | D7004_14385 | Not Available | Positive | 3437634 - 3437957 | 11720.3 |
| pas domain s-box protein | D7004_14390 | Not Available | Negative | 3438476 - 3438676 | 7887.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

