Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit | D7004_14120 | Not Available | Negative | 3382212 - 3384761 | 94856.6 |
| hypothetical protein | D7004_14125 | Not Available | Positive | 3385533 - 3385766 | 8793.39 |
| duf4394 domain-containing protein | D7004_14130 | Not Available | Positive | 3385820 - 3387343 | 52337.9 |
| type ii toxin-antitoxin system rele/pare family toxin | D7004_14135 | Not Available | Positive | 3387496 - 3387837 | 13618.5 |
| xre family transcriptional regulator | D7004_14140 | Not Available | Positive | 3387840 - 3388166 | 12204.9 |
| dmt family transporter | D7004_14145 | Not Available | Negative | 3388230 - 3389096 | 30502.0 |
| duf3095 domain-containing protein | D7004_14150 | Not Available | Negative | 3389162 - 3390316 | 43432.5 |
| duf11 domain-containing protein | D7004_14155 | Not Available | Positive | 3390687 - 3392020 | 45471.8 |
| atp-binding protein | D7004_14160 | Not Available | Positive | 3392021 - 3392174 | 5882.12 |
| copper oxidase | D7004_14170 | Not Available | Positive | 3392674 - 3395175 | 94899.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

