Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cbs domain-containing protein | D7004_13920 | Not Available | Positive | 3339631 - 3340683 | 39690.0 |
| hypothetical protein | D7004_13925 | Not Available | Positive | 3340699 - 3340905 | 7767.21 |
| conjugal transfer protein trag | D7004_13930 | Not Available | Negative | 3340937 - 3342973 | 76542.4 |
| relaxase | D7004_13935 | Not Available | Negative | 3342984 - 3344240 | 47772.9 |
| plasmid mobilization relaxosome protein mobc | D7004_13940 | Not Available | Negative | 3344225 - 3344632 | 15753.4 |
| recombinase family protein | D7004_13945 | Not Available | Positive | 3345363 - 3346934 | 60438.4 |
| Trna-leu | Not Available | Not Available | Positive | 3346900 - 3346983 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 3347030 - 3347105 | Not Available |
| recx family transcriptional regulator | D7004_13960 | Not Available | Negative | 3347287 - 3347766 | 18698.6 |
| bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemase | D7004_13965 | Not Available | Positive | 3347828 - 3350287 | 91346.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

