Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-n-arabinofuranosidase | D7004_01300 | Not Available | Positive | 294563 - 296101 | 57604.7 |
| glycoside hydrolase family 97 protein | D7004_01305 | Not Available | Positive | 296105 - 298039 | 73538.3 |
| glycosyl hydrolase | D7004_01310 | Not Available | Positive | 298046 - 298981 | 35730.6 |
| glycoside hydrolase family 3 protein | D7004_01315 | Not Available | Positive | 299359 - 301947 | 96218.8 |
| pantetheine-phosphate adenylyltransferase | D7004_01320 | Not Available | Positive | 302919 - 303389 | 17587.4 |
| nudix domain-containing protein | D7004_01325 | Not Available | Negative | 303461 - 304072 | 23579.9 |
| orotate phosphoribosyltransferase | D7004_01330 | Not Available | Positive | 304071 - 304721 | 23801.5 |
| srpbcc family protein | D7004_01335 | Not Available | Positive | 304769 - 305167 | 14934.9 |
| hypothetical protein | D7004_01340 | Not Available | Positive | 305275 - 305517 | 9492.09 |
| atp-dependent chaperone clpb | D7004_01345 | Not Available | Positive | 306279 - 308876 | 97518.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

