Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylmethionine--8-amino-7-oxononanoate transaminase | D7004_13355 | Not Available | Negative | 3199799 - 3201064 | 47215.1 |
| cpbp family intramembrane metalloprotease | D7004_13360 | Not Available | Negative | 3201061 - 3201906 | 31797.4 |
| nudix domain-containing protein | D7004_13365 | Not Available | Negative | 3201896 - 3202351 | 17298.4 |
| cation transporter | D7004_13370 | Not Available | Negative | 3202338 - 3203324 | 36805.0 |
| pyridoxal phosphate-dependent aminotransferase | D7004_13375 | Not Available | Positive | 3203491 - 3204633 | 42093.1 |
| abc transporter atp-binding protein | D7004_13380 | Not Available | Positive | 3204773 - 3206584 | 68139.4 |
| glycosyltransferase | D7004_13385 | Not Available | Positive | 3206588 - 3207769 | 44491.7 |
| hypothetical protein | D7004_13390 | Not Available | Positive | 3207753 - 3208805 | 40814.9 |
| hypothetical protein | D7004_13395 | Not Available | Positive | 3208792 - 3209799 | 38997.8 |
| glycosyltransferase family 2 protein | D7004_13400 | Not Available | Positive | 3210072 - 3211037 | 37483.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

