Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | D7004_13305 | Not Available | Negative | 3184554 - 3184976 | 15600.2 |
| hypothetical protein | D7004_13310 | Not Available | Positive | 3185204 - 3190798 | 207586.0 |
| penicillin-binding protein 1c | D7004_13315 | Not Available | Positive | 3190893 - 3193271 | 88919.0 |
| lysoplasmalogenase | D7004_13320 | Not Available | Negative | 3193914 - 3194606 | 26200.2 |
| sterol desaturase family protein | D7004_13325 | Not Available | Negative | 3194596 - 3195813 | 47256.7 |
| response regulator | D7004_13330 | Not Available | Positive | 3195802 - 3196296 | 19358.8 |
| hypothetical protein | D7004_13335 | Not Available | Positive | 3196311 - 3196940 | 22508.6 |
| dna polymerase iii subunit epsilon | D7004_13340 | Not Available | Positive | 3197170 - 3198543 | 51794.5 |
| mmcq/yjbr family dna-binding protein | D7004_13345 | Not Available | Positive | 3198546 - 3198884 | 12776.3 |
| extradiol dioxygenase | D7004_13350 | Not Available | Positive | 3198943 - 3199359 | 15178.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

