Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 92 protein | D7004_13255 | Not Available | Negative | 3168721 - 3170874 | 80375.3 |
| crp/fnr family transcriptional regulator | D7004_13260 | Not Available | Positive | 3171052 - 3171621 | 21435.8 |
| sdr family oxidoreductase | D7004_13265 | Not Available | Positive | 3171691 - 3172404 | 25995.6 |
| glycoside hydrolase family 125 protein | D7004_13270 | Not Available | Negative | 3172509 - 3173933 | 53540.8 |
| glycoside hydrolase family 92 protein | D7004_13275 | Not Available | Negative | 3174090 - 3176375 | 86011.0 |
| trna 2-thiouridine(34) synthase mnma | D7004_13280 | Not Available | Positive | 3176728 - 3177819 | 40454.2 |
| aquaporin z | D7004_13285 | Not Available | Positive | 3178286 - 3178993 | 24008.8 |
| glutathione peroxidase | D7004_13290 | Not Available | Negative | 3179436 - 3179951 | 19385.6 |
| type i dna topoisomerase | D7004_13295 | Not Available | Positive | 3181246 - 3183795 | 95837.8 |
| hypothetical protein | D7004_13300 | Not Available | Positive | 3184003 - 3184407 | 15173.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

