Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D7004_13205 | Not Available | Negative | 3159732 - 3160487 | 29940.9 |
| isopentenyl-diphosphate delta-isomerase | D7004_13210 | Not Available | Negative | 3161047 - 3161625 | 22693.6 |
| doxx family membrane protein | D7004_13215 | Not Available | Negative | 3161622 - 3162506 | 33560.8 |
| carboxypeptidase-like regulatory domain-containing protein | D7004_13220 | Not Available | Negative | 3162506 - 3163702 | 44620.3 |
| hypothetical protein | D7004_13225 | Not Available | Negative | 3164009 - 3165199 | 45074.8 |
| hypothetical protein | D7004_13230 | Not Available | Negative | 3165189 - 3165500 | 11744.9 |
| dna-binding response regulator | D7004_13235 | Not Available | Negative | 3165582 - 3166175 | 22278.8 |
| hd domain-containing protein | D7004_13240 | Not Available | Negative | 3166252 - 3166842 | 22688.5 |
| tigr03643 family protein | D7004_13245 | Not Available | Positive | 3167073 - 3167354 | 11351.8 |
| deoxyribodipyrimidine photolyase | D7004_13250 | Not Available | Positive | 3167360 - 3168475 | 43284.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

