Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1810 domain-containing protein | D7004_01250 | Not Available | Positive | 277770 - 278189 | 15854.2 |
| glycoside hydrolase family 97 protein | D7004_01255 | Not Available | Negative | 278201 - 280159 | 73574.1 |
| 1,4-beta-xylanase | D7004_01260 | Not Available | Negative | 280219 - 281295 | 41303.2 |
| glycosyl hydrolase family 43 | D7004_01265 | Not Available | Negative | 281306 - 282331 | 38616.4 |
| histidine kinase | D7004_01270 | Not Available | Positive | 282579 - 285746 | 120648.0 |
| dna-binding response regulator | D7004_01275 | Not Available | Positive | 285731 - 286537 | 30617.2 |
| susc/raga family tonb-linked outer membrane protein | D7004_01280 | Not Available | Positive | 287097 - 290120 | 110311.0 |
| ragb/susd family nutrient uptake outer membrane protein | D7004_01285 | Not Available | Positive | 290137 - 291855 | 65191.4 |
| susf/suse family outer membrane protein | D7004_01290 | Not Available | Positive | 291880 - 292341 | 16582.0 |
| alpha-l-arabinofuranosidase | D7004_01295 | Not Available | Positive | 292555 - 294555 | 74508.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

