Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histone h1 | D7004_13050 | Not Available | Negative | 3126368 - 3126547 | 6397.71 |
| biliverdin-producing heme oxygenase | D7004_13055 | Not Available | Negative | 3126720 - 3127304 | 21966.3 |
| response regulator | D7004_13060 | Not Available | Negative | 3127387 - 3127806 | 15873.0 |
| gaf domain-containing protein | D7004_13065 | Not Available | Negative | 3127808 - 3130018 | 83572.4 |
| dna-binding response regulator | D7004_13070 | Not Available | Positive | 3130156 - 3130530 | 13932.1 |
| mechanosensitive ion channel family protein | D7004_13075 | Not Available | Negative | 3130534 - 3131340 | 29900.2 |
| alpha/beta hydrolase | D7004_13080 | Not Available | Positive | 3131909 - 3133027 | 39530.6 |
| ku protein | D7004_13085 | Not Available | Negative | 3133096 - 3133866 | 29251.5 |
| glycosyltransferase | D7004_13090 | Not Available | Positive | 3134003 - 3136273 | 85861.7 |
| glycosidase | D7004_13095 | Not Available | Negative | 3136341 - 3137813 | 56433.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

