Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D7004_13000 | Not Available | Positive | 3116693 - 3116911 | 8380.29 |
| hypothetical protein | D7004_13005 | Not Available | Positive | 3117014 - 3117217 | 7721.53 |
| hypothetical protein | D7004_13010 | Not Available | Negative | 3117311 - 3118315 | 36325.0 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | D7004_13015 | Not Available | Positive | 3118908 - 3120215 | 47348.2 |
| homoserine o-acetyltransferase | D7004_13020 | Not Available | Positive | 3120342 - 3121385 | 39038.2 |
| homoserine dehydrogenase | D7004_13025 | Not Available | Positive | 3121585 - 3122829 | 46541.4 |
| hypothetical protein | D7004_13030 | Not Available | Negative | 3122900 - 3123244 | 13355.3 |
| duf4065 domain-containing protein | D7004_13035 | Not Available | Negative | 3123247 - 3124044 | 30866.8 |
| vut family protein | D7004_13040 | Not Available | Negative | 3124101 - 3124871 | 28737.8 |
| bcr/cfla family efflux mfs transporter | D7004_13045 | Not Available | Positive | 3125024 - 3126199 | 42288.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

