Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4142 domain-containing protein | D7004_12900 | Not Available | Positive | 3095283 - 3095876 | 21402.7 |
| peptidase s8 | D7004_12905 | Not Available | Positive | 3096031 - 3097644 | 58513.8 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | D7004_12910 | Not Available | Negative | 3097732 - 3099855 | 76327.5 |
| xanthine dehydrogenase family protein subunit m | D7004_12915 | Not Available | Negative | 3099858 - 3100841 | 35517.4 |
| (2fe-2s)-binding protein | D7004_12920 | Not Available | Negative | 3100838 - 3101461 | 22325.6 |
| duf480 domain-containing protein | D7004_12925 | Not Available | Positive | 3101633 - 3102283 | 24172.0 |
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | D7004_12930 | Not Available | Negative | 3102284 - 3103534 | 43896.1 |
| duf2798 domain-containing protein | D7004_12935 | Not Available | Negative | 3103539 - 3103763 | 8291.32 |
| sdr family nad(p)-dependent oxidoreductase | D7004_12940 | Not Available | Negative | 3103801 - 3104550 | 27043.7 |
| tetr/acrr family transcriptional regulator | D7004_12945 | Not Available | Negative | 3104601 - 3105188 | 21313.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

