Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | D7004_12850 | Not Available | Negative | 3081016 - 3084285 | 118522.0 |
| fatty acid hydroxylase family protein | D7004_12855 | Not Available | Negative | 3084782 - 3086005 | 48301.8 |
| rok family protein | D7004_12860 | Not Available | Positive | 3086163 - 3086921 | 27739.3 |
| nadp-dependent phosphogluconate dehydrogenase | D7004_12865 | Not Available | Positive | 3087018 - 3088430 | 52059.1 |
| glucose-6-phosphate dehydrogenase | D7004_12870 | Not Available | Positive | 3088458 - 3089972 | 58086.2 |
| 6-phosphogluconolactonase | D7004_12875 | Not Available | Positive | 3090096 - 3090821 | 27288.1 |
| exopolyphosphatase | D7004_12880 | Not Available | Negative | 3090984 - 3091865 | 32867.9 |
| polyphosphate kinase 1 | D7004_12885 | Not Available | Negative | 3091867 - 3093924 | 79403.7 |
| hypothetical protein | D7004_12890 | Not Available | Negative | 3094027 - 3094638 | 21771.2 |
| yajq family cyclic di-gmp-binding protein | D7004_12895 | Not Available | Positive | 3094714 - 3095205 | 18151.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

