Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolb protein precursor | D7004_12795 | Not Available | Positive | 3067380 - 3070529 | 118297.0 |
| giy-yig nuclease family protein | D7004_12800 | Not Available | Negative | 3071213 - 3071563 | 13777.8 |
| lexa family transcriptional regulator | D7004_12805 | Not Available | Positive | 3071697 - 3072473 | 29242.0 |
| pyridoxal phosphate-dependent aminotransferase family protein | D7004_12815 | Not Available | Positive | 3073058 - 3074188 | 41642.8 |
| dethiobiotin synthase | D7004_12820 | Not Available | Positive | 3074181 - 3074789 | 22692.5 |
| sialate o-acetylesterase | D7004_12825 | Not Available | Negative | 3074781 - 3075473 | 26505.3 |
| glycerophosphodiester phosphodiesterase | D7004_12830 | Not Available | Negative | 3075497 - 3076396 | 33650.2 |
| metallophosphoesterase | D7004_12835 | Not Available | Negative | 3076415 - 3077824 | 53228.1 |
| hypothetical protein | D7004_12840 | Not Available | Negative | 3077910 - 3079418 | 53142.9 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | D7004_12845 | Not Available | Negative | 3079436 - 3080995 | 57565.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

