Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | D7004_12745 | Not Available | Positive | 3056886 - 3058010 | 41862.7 |
| phosphatase pap2 family protein | D7004_12750 | Not Available | Positive | 3058086 - 3058745 | 25008.6 |
| rna polymerase sigma factor | D7004_12755 | Not Available | Positive | 3059038 - 3059559 | 20009.0 |
| had family phosphatase | D7004_12760 | Not Available | Positive | 3059795 - 3060475 | 25513.8 |
| hypothetical protein | D7004_12765 | Not Available | Positive | 3060542 - 3061345 | 30745.1 |
| hypothetical protein | D7004_12770 | Not Available | Negative | 3061538 - 3061732 | 7258.84 |
| atpase | D7004_12775 | Not Available | Negative | 3062123 - 3063205 | 41510.0 |
| voc family protein | D7004_12780 | Not Available | Negative | 3063300 - 3063701 | 14952.6 |
| polyphosphate kinase 2 family protein | D7004_12785 | Not Available | Negative | 3063817 - 3064695 | 33969.3 |
| penicillin-binding protein | D7004_12790 | Not Available | Positive | 3064824 - 3067265 | 92872.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

