Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class i and ii | D7004_12695 | Not Available | Negative | 3046504 - 3047295 | 30016.0 |
| hypothetical protein | D7004_12700 | Not Available | Positive | 3047421 - 3047798 | 15049.9 |
| isopentenyl-diphosphate delta-isomerase | D7004_12705 | Not Available | Negative | 3047954 - 3048472 | 19987.9 |
| phytoene/squalene synthase family protein | D7004_12710 | Not Available | Negative | 3048534 - 3049370 | 32433.3 |
| merr family transcriptional regulator | D7004_12715 | Not Available | Negative | 3049367 - 3050260 | 34098.3 |
| dna-binding response regulator | D7004_12720 | Not Available | Positive | 3050556 - 3051296 | 28286.2 |
| hypothetical protein | D7004_12725 | Not Available | Positive | 3051321 - 3052400 | 42259.6 |
| dna-binding response regulator | D7004_12730 | Not Available | Positive | 3052520 - 3053263 | 28222.3 |
| pkd domain-containing protein | D7004_12735 | Not Available | Negative | 3053309 - 3056008 | 98931.3 |
| hypothetical protein | D7004_12740 | Not Available | Positive | 3056186 - 3056536 | 12769.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

