Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-(carboxyamino)imidazole ribonucleotide mutase | D7004_12595 | Not Available | Positive | 3024350 - 3024865 | 18004.8 |
| yqge/algh family protein | D7004_12600 | Not Available | Negative | 3024930 - 3025493 | 21108.0 |
| pyridoxamine 5'-phosphate oxidase | D7004_12605 | Not Available | Positive | 3025539 - 3026189 | 24945.6 |
| 3-hydroxybutyryl-coa dehydrogenase | D7004_12610 | Not Available | Positive | 3026298 - 3027191 | 31991.8 |
| holliday junction branch migration dna helicase ruvb | D7004_12615 | Not Available | Positive | 3027223 - 3028245 | 37517.2 |
| hypothetical protein | D7004_12620 | Not Available | Positive | 3028313 - 3028495 | 6920.51 |
| gnat family n-acetyltransferase | D7004_12625 | Not Available | Positive | 3028492 - 3030000 | 57608.1 |
| hypothetical protein | D7004_12630 | Not Available | Negative | 3030061 - 3030267 | 7490.98 |
| trna epoxyqueuosine(34) reductase queg | D7004_12635 | Not Available | Positive | 3030414 - 3031352 | 35494.2 |
| peptidase | D7004_12640 | Not Available | Negative | 3031428 - 3033287 | 70335.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

