Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trmh family rna methyltransferase | D7004_12440 | Not Available | Positive | 2993761 - 2994291 | 19583.5 |
| ompa family protein | D7004_12445 | Not Available | Positive | 2994532 - 2995815 | 45997.1 |
| dead/deah box helicase | D7004_12450 | Not Available | Negative | 2996264 - 2997562 | 48929.2 |
| hypothetical protein | D7004_12455 | Not Available | Positive | 2997911 - 2998168 | 10352.4 |
| ld-carboxypeptidase | D7004_12460 | Not Available | Positive | 2998555 - 2999577 | 37877.5 |
| hypothetical protein | D7004_12465 | Not Available | Positive | 2999701 - 2999910 | 7778.35 |
| txe/yoeb family addiction module toxin | D7004_12470 | Not Available | Positive | 2999892 - 3000173 | 10811.0 |
| nicotinamide mononucleotide adenylyltransferase | D7004_12475 | Not Available | Negative | 3000177 - 3001493 | 49622.3 |
| hsp20/alpha crystallin family protein | D7004_12480 | Not Available | Negative | 3001665 - 3002099 | 16537.3 |
| acyl-coa thioesterase | D7004_12485 | Not Available | Positive | 3002168 - 3002653 | 18838.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

