Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii 3-dehydroquinate dehydratase | D7004_12390 | Not Available | Negative | 2985264 - 2985689 | 15575.8 |
| site-specific tyrosine recombinase xerd | D7004_12395 | Not Available | Positive | 2985820 - 2986719 | 33566.0 |
| peptide chain release factor n(5)-glutamine methyltransferase | D7004_12400 | Not Available | Negative | 2986716 - 2987561 | 32004.6 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | D7004_12405 | Not Available | Positive | 2987623 - 2988675 | 39693.6 |
| dmt family transporter | D7004_12410 | Not Available | Positive | 2988672 - 2989541 | 32209.1 |
| yigz family protein | D7004_12415 | Not Available | Positive | 2989531 - 2990145 | 23171.2 |
| phosphorylase | D7004_12420 | Not Available | Positive | 2990157 - 2991017 | 31575.8 |
| duf1398 domain-containing protein | D7004_12425 | Not Available | Negative | 2990992 - 2991408 | 15870.8 |
| galactose mutarotase | D7004_12430 | Not Available | Negative | 2991411 - 2992451 | 38705.4 |
| galactokinase | D7004_12435 | Not Available | Positive | 2992516 - 2993667 | 42711.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

