Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen-dependent coproporphyrinogen oxidase | D7004_12290 | Not Available | Positive | 2963274 - 2964167 | 34788.9 |
| endonuclease v | D7004_12295 | Not Available | Negative | 2964164 - 2964862 | 25716.2 |
| tetratricopeptide repeat protein | D7004_12300 | Not Available | Negative | 2964992 - 2966137 | 43156.2 |
| hypothetical protein | D7004_12305 | Not Available | Negative | 2966222 - 2967310 | 39513.4 |
| dna gyrase subunit a | D7004_12310 | Not Available | Negative | 2967341 - 2969935 | 97246.2 |
| mfs transporter | D7004_12315 | Not Available | Positive | 2970213 - 2971424 | 43822.9 |
| hypothetical protein | D7004_12320 | Not Available | Negative | 2971421 - 2972185 | 29285.2 |
| phoh family protein | D7004_12325 | Not Available | Negative | 2972219 - 2973571 | 50892.1 |
| gxxexxy protein | D7004_12330 | Not Available | Negative | 2973785 - 2974162 | 14005.4 |
| fusc family protein | D7004_12335 | Not Available | Positive | 2974889 - 2977048 | 82814.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

