Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D7004_12185 | Not Available | Positive | 2946746 - 2947336 | 22207.7 |
| abc transporter substrate-binding protein | D7004_12190 | Not Available | Positive | 2947490 - 2948422 | 34875.4 |
| nad-dependent deacylase | D7004_12195 | Not Available | Positive | 2948425 - 2949111 | 25425.5 |
| adenine nucleotide alpha hydrolase | D7004_12200 | Not Available | Positive | 2949101 - 2949820 | 27482.4 |
| hypothetical protein | D7004_12205 | Not Available | Positive | 2949952 - 2950452 | 16966.4 |
| dabb family protein | D7004_12210 | Not Available | Positive | 2950545 - 2950892 | 13064.6 |
| hypothetical protein | D7004_12215 | Not Available | Negative | 2951190 - 2951441 | 9697.62 |
| duf3291 domain-containing protein | D7004_12220 | Not Available | Negative | 2951466 - 2952152 | 26283.8 |
| gaf domain-containing protein | D7004_12225 | Not Available | Positive | 2952377 - 2952856 | 17646.2 |
| dna-3-methyladenine glycosylase | D7004_12230 | Not Available | Positive | 2952870 - 2953475 | 22244.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

