Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps-assembly protein lptd | D7004_11985 | Not Available | Positive | 2894571 - 2897228 | 99483.2 |
| competence/damage-inducible protein a | D7004_11990 | Not Available | Positive | 2897233 - 2898486 | 45955.5 |
| 2-oxo acid dehydrogenase subunit e2 | D7004_11995 | Not Available | Positive | 2898534 - 2899877 | 48455.3 |
| hypothetical protein | D7004_12000 | Not Available | Positive | 2899926 - 2900540 | 23376.9 |
| ligase-associated dna damage response endonuclease pdem | D7004_12005 | Not Available | Negative | 2900742 - 2901380 | 23987.8 |
| ligase-associated dna damage response dexh box helicase | D7004_12010 | Not Available | Negative | 2901585 - 2904062 | 93658.6 |
| atp-dependent dna ligase | D7004_12015 | Not Available | Negative | 2904359 - 2905948 | 61107.1 |
| ligase-associated dna damage response exonuclease | D7004_12020 | Not Available | Negative | 2905945 - 2907000 | 39487.4 |
| transcriptional regulator | D7004_12025 | Not Available | Positive | 2907154 - 2907765 | 22582.6 |
| duf3307 domain-containing protein | D7004_12030 | Not Available | Positive | 2907765 - 2908475 | 26888.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

