Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D7004_11885 | Not Available | Negative | 2871334 - 2871594 | 9794.66 |
| bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase | D7004_11890 | Not Available | Negative | 2871743 - 2872624 | 31969.8 |
| elongation factor 4 | D7004_11895 | Not Available | Negative | 2872711 - 2874498 | 66698.8 |
| mate family efflux transporter | D7004_11900 | Not Available | Negative | 2874773 - 2876197 | 50974.6 |
| acyl-coa thioesterase | D7004_11905 | Not Available | Negative | 2876476 - 2876895 | 16347.8 |
| 30s ribosomal protein s15 | D7004_11910 | Not Available | Positive | 2877294 - 2877578 | 10964.5 |
| polyribonucleotide nucleotidyltransferase | D7004_11915 | Not Available | Positive | 2877753 - 2879888 | 77479.2 |
| ribulose-phosphate 3-epimerase | D7004_11920 | Not Available | Positive | 2880128 - 2880799 | 24249.4 |
| tonb-dependent receptor | D7004_11925 | Not Available | Positive | 2880938 - 2883358 | 91648.4 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | D7004_11930 | Not Available | Positive | 2883958 - 2885031 | 39429.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

