Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosylasparaginase | D7004_11730 | Not Available | Negative | 2839925 - 2840959 | 37110.8 |
| nitrilase family protein | D7004_11735 | Not Available | Negative | 2841017 - 2841796 | 30436.5 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | D7004_11740 | Not Available | Negative | 2841844 - 2842989 | 42869.6 |
| laci family transcriptional regulator | D7004_11745 | Not Available | Negative | 2843166 - 2844185 | 38289.1 |
| mbl fold metallo-hydrolase | D7004_11750 | Not Available | Positive | 2844394 - 2845482 | 41514.4 |
| hypothetical protein | D7004_11755 | Not Available | Positive | 2845533 - 2845892 | 13666.9 |
| hypothetical protein | D7004_11760 | Not Available | Positive | 2845957 - 2846751 | 30405.8 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | D7004_11765 | Not Available | Positive | 2846768 - 2847700 | 35403.0 |
| hypothetical protein | D7004_11770 | Not Available | Positive | 2847805 - 2848302 | 17245.3 |
| hypothetical protein | D7004_11775 | Not Available | Positive | 2848456 - 2848998 | 19448.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

