Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialidase | D7004_11570 | Not Available | Positive | 2795831 - 2796967 | 41563.9 |
| giy-yig nuclease family protein | D7004_11575 | Not Available | Positive | 2798057 - 2798350 | 11649.9 |
| acetylxylan esterase | D7004_11580 | Not Available | Positive | 2798802 - 2800193 | 52570.2 |
| sugar phosphate isomerase/epimerase | D7004_11585 | Not Available | Positive | 2800193 - 2801101 | 33956.6 |
| l-rhamnose mutarotase | D7004_11590 | Not Available | Positive | 2801165 - 2803735 | 97119.9 |
| na+/glucose cotransporter | D7004_11600 | Not Available | Positive | 2805193 - 2806782 | 58514.3 |
| alpha-rhamnosidase | D7004_11605 | Not Available | Positive | 2806864 - 2809029 | 82567.8 |
| iclr family transcriptional regulator | D7004_11610 | Not Available | Negative | 2809145 - 2809918 | 28509.5 |
| glycosylase | D7004_11620 | Not Available | Positive | 2812942 - 2814048 | 42901.2 |
| duf4982 domain-containing protein | D7004_11625 | Not Available | Positive | 2814209 - 2816572 | 88835.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

