Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | D7004_11520 | Not Available | Positive | 2774207 - 2776051 | 67094.7 |
| polysaccharide lyase | D7004_11525 | Not Available | Positive | 2776441 - 2778099 | 60892.6 |
| polysaccharide lyase | D7004_11530 | Not Available | Positive | 2778101 - 2779741 | 59877.1 |
| pectate lyase | D7004_11535 | Not Available | Positive | 2780260 - 2783376 | 115859.0 |
| duf4038 domain-containing protein | D7004_11540 | Not Available | Positive | 2783380 - 2784780 | 53111.7 |
| arabinosidase | D7004_11545 | Not Available | Positive | 2785002 - 2785916 | 34674.5 |
| six-hairpin glycosidase | D7004_11550 | Not Available | Positive | 2786006 - 2787838 | 68863.5 |
| sialate o-acetylesterase | D7004_11555 | Not Available | Positive | 2788068 - 2789396 | 49775.6 |
| glycoside hydrolase family 2 | D7004_11560 | Not Available | Positive | 2789396 - 2792203 | 106607.0 |
| alpha-rhamnosidase | D7004_11565 | Not Available | Positive | 2792302 - 2795037 | 104154.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

