Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhamnogalacturonan acetylesterase | D7004_11370 | Not Available | Positive | 2717045 - 2717818 | 28790.7 |
| rhamnogalacturonan acetylesterase | D7004_11375 | Not Available | Positive | 2717929 - 2718723 | 29497.5 |
| beta-glucuronidase | D7004_11380 | Not Available | Positive | 2718927 - 2721833 | 109530.0 |
| glycoside hydrolase family 88 protein | D7004_11385 | Not Available | Positive | 2721864 - 2723006 | 43428.4 |
| l-rhamnose mutarotase | D7004_11390 | Not Available | Positive | 2723053 - 2723361 | 11896.2 |
| glycoside hydrolase | D7004_11395 | Not Available | Positive | 2723367 - 2726138 | 103442.0 |
| hypothetical protein | D7004_11400 | Not Available | Negative | 2726207 - 2728576 | 90378.1 |
| beta-xylosidase | D7004_11405 | Not Available | Negative | 2728688 - 2730298 | 60704.9 |
| ragb/susd family nutrient uptake outer membrane protein | D7004_11410 | Not Available | Negative | 2730561 - 2732561 | 74335.9 |
| tonb-dependent receptor | D7004_11415 | Not Available | Negative | 2732576 - 2735800 | 117267.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

