Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna ligase d | D7004_11320 | Not Available | Positive | 2701707 - 2704412 | 102333.0 |
| aquaporin family protein | D7004_11325 | Not Available | Negative | 2704599 - 2705336 | 26014.4 |
| glycerol kinase | D7004_11330 | Not Available | Negative | 2705369 - 2706859 | 54151.8 |
| glycerol-3-phosphate dehydrogenase/oxidase | D7004_11335 | Not Available | Negative | 2706879 - 2708471 | 58638.6 |
| deor/glpr transcriptional regulator | D7004_11340 | Not Available | Positive | 2708625 - 2709389 | 27916.9 |
| dna-binding response regulator | D7004_11345 | Not Available | Positive | 2709431 - 2709823 | 14805.8 |
| hypothetical protein | D7004_11350 | Not Available | Negative | 2709885 - 2710217 | 12796.4 |
| alpha-rhamnosidase | D7004_11355 | Not Available | Positive | 2710422 - 2713079 | 99756.7 |
| rhamnogalacturonan acetylesterase | D7004_11360 | Not Available | Positive | 2713803 - 2715131 | 49149.3 |
| rhamnogalacturonan lyase | D7004_11365 | Not Available | Positive | 2715176 - 2717032 | 68401.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

