Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent transcriptional regulator | D7004_01050 | Not Available | Positive | 232010 - 232672 | 24914.9 |
| iron/manganese transporter | D7004_01055 | Not Available | Positive | 232659 - 234521 | 68375.8 |
| hypothetical protein | D7004_01060 | Not Available | Negative | 234511 - 234987 | 18077.2 |
| ssra-binding protein smpb | D7004_01065 | Not Available | Positive | 235194 - 235643 | 17414.3 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | D7004_01070 | Not Available | Negative | 235770 - 236426 | 24523.8 |
| hypothetical protein | D7004_01075 | Not Available | Positive | 236616 - 237302 | 25715.6 |
| primosomal protein n' | D7004_01080 | Not Available | Negative | 237299 - 239779 | 93598.6 |
| duf423 domain-containing protein | D7004_01085 | Not Available | Negative | 239779 - 240165 | 14216.7 |
| hypothetical protein | D7004_01090 | Not Available | Positive | 240257 - 241825 | 60014.4 |
| hypothetical protein | D7004_01095 | Not Available | Positive | 241864 - 243264 | 52488.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

