Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ergothioneine biosynthesis protein egtb | D7004_11065 | Not Available | Positive | 2641914 - 2643065 | 45163.8 |
| l-histidine n(alpha)-methyltransferase | D7004_11070 | Not Available | Positive | 2643072 - 2644043 | 36845.7 |
| aminotransferase class v-fold plp-dependent enzyme | D7004_11075 | Not Available | Negative | 2644044 - 2645114 | 39816.3 |
| tonb-dependent receptor | D7004_11080 | Not Available | Positive | 2645355 - 2648642 | 121604.0 |
| ragb/susd family nutrient uptake outer membrane protein | D7004_11085 | Not Available | Positive | 2648671 - 2650446 | 66279.4 |
| hypothetical protein | D7004_11095 | Not Available | Positive | 2651562 - 2651933 | 13937.3 |
| marr family transcriptional regulator | D7004_11100 | Not Available | Negative | 2651963 - 2652580 | 23187.0 |
| sdr family oxidoreductase | D7004_11105 | Not Available | Negative | 2652607 - 2653326 | 25168.2 |
| gtp cyclohydrolase i fole | D7004_11110 | Not Available | Negative | 2653326 - 2653979 | 24676.6 |
| laci family transcriptional regulator | D7004_11115 | Not Available | Negative | 2654175 - 2655170 | 36831.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

