Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | D7004_10965 | Not Available | Positive | 2611565 - 2612605 | 39245.6 |
| atp-binding protein | D7004_10970 | Not Available | Positive | 2612580 - 2617688 | 196502.0 |
| hypothetical protein | D7004_10975 | Not Available | Positive | 2618478 - 2620916 | 89149.7 |
| susc/raga family tonb-linked outer membrane protein | D7004_10980 | Not Available | Positive | 2621175 - 2624162 | 108841.0 |
| ragb/susd family nutrient uptake outer membrane protein | D7004_10985 | Not Available | Positive | 2624174 - 2625763 | 59758.5 |
| hypothetical protein | D7004_10990 | Not Available | Positive | 2625786 - 2626850 | 39695.8 |
| alkaline phosphatase | D7004_10995 | Not Available | Positive | 2626860 - 2628263 | 51340.9 |
| php domain-containing protein | D7004_11000 | Not Available | Positive | 2628325 - 2629497 | 43622.7 |
| gaf domain-containing sensor histidine kinase | D7004_11005 | Not Available | Negative | 2629494 - 2630681 | 44232.2 |
| pa2169 family four-helix-bundle protein | D7004_11010 | Not Available | Positive | 2630954 - 2631415 | 16698.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

