Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide epimerase | D7004_10915 | Not Available | Positive | 2601947 - 2602990 | 38686.0 |
| hypothetical protein | D7004_10920 | Not Available | Negative | 2602956 - 2603153 | 7527.45 |
| rhodanese-like domain-containing protein | D7004_10925 | Not Available | Negative | 2603381 - 2603698 | 11943.3 |
| duf4407 domain-containing protein | D7004_10930 | Not Available | Positive | 2603968 - 2605092 | 42525.9 |
| m61 family peptidase | D7004_10935 | Not Available | Positive | 2605292 - 2607124 | 67960.5 |
| m20/m25/m40 family metallo-hydrolase | D7004_10940 | Not Available | Positive | 2607171 - 2608478 | 48028.5 |
| gnat family n-acetyltransferase | D7004_10945 | Not Available | Negative | 2608659 - 2609153 | 18550.5 |
| thiamine pyrophosphokinase | D7004_10950 | Not Available | Negative | 2609150 - 2609710 | 20960.9 |
| thiamine phosphate synthase | D7004_10955 | Not Available | Negative | 2609819 - 2610451 | 23309.3 |
| hypothetical protein | D7004_10960 | Not Available | Positive | 2611013 - 2611564 | 21032.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

