Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D7004_10660 | Not Available | Positive | 2548816 - 2549382 | 21472.1 |
| phosphoesterase | D7004_10665 | Not Available | Negative | 2549604 - 2550350 | 28512.8 |
| type ii toxin-antitoxin system hipa family toxin | D7004_10670 | Not Available | Negative | 2550514 - 2551731 | 45680.9 |
| xre family transcriptional regulator | D7004_10675 | Not Available | Negative | 2551803 - 2552126 | 12109.9 |
| site-specific integrase | D7004_10680 | Not Available | Negative | 2552237 - 2553508 | 49575.4 |
| gdp-mannose 4,6-dehydratase | D7004_10685 | Not Available | Negative | 2554293 - 2555405 | 41885.3 |
| sigma-70 family rna polymerase sigma factor | D7004_10690 | Not Available | Negative | 2555455 - 2556033 | 22055.6 |
| glycosyltransferase | D7004_10695 | Not Available | Positive | 2556315 - 2557067 | 28632.6 |
| exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase | D7004_10700 | Not Available | Positive | 2557088 - 2558476 | 53566.9 |
| glycosyltransferase | D7004_10705 | Not Available | Negative | 2558451 - 2559617 | 44903.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

