Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase y family protein | D7004_10450 | Not Available | Positive | 2500214 - 2501710 | 57023.2 |
| dna polymerase iii subunit alpha | D7004_10455 | Not Available | Positive | 2501735 - 2504968 | 122448.0 |
| gaf domain-containing sensor histidine kinase | D7004_10460 | Not Available | Negative | 2505663 - 2506850 | 43715.2 |
| Tmrna,resume consensus sequence (at 89): tttagttggcgaaaatac | Not Available | Not Available | Positive | 2507406 - 2507769 | Not Available |
| hypothetical protein | D7004_10470 | Not Available | Negative | 2507853 - 2508806 | 36316.4 |
| duf4159 domain-containing protein | D7004_10480 | Not Available | Negative | 2509625 - 2510254 | 24205.4 |
| moxr family atpase | D7004_10485 | Not Available | Positive | 2510406 - 2511404 | 36985.2 |
| duf58 domain-containing protein | D7004_10490 | Not Available | Positive | 2511434 - 2512291 | 33001.3 |
| hypothetical protein | D7004_10495 | Not Available | Positive | 2512279 - 2513661 | 51663.4 |
| duf4175 family protein | D7004_10500 | Not Available | Positive | 2513648 - 2515780 | 80887.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

