Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | D7004_10190 | Not Available | Negative | 2421736 - 2423142 | 51096.7 |
| efflux rnd transporter permease subunit | D7004_10195 | Not Available | Negative | 2423129 - 2426323 | 115545.0 |
| efflux rnd transporter periplasmic adaptor subunit | D7004_10200 | Not Available | Negative | 2426362 - 2427564 | 43002.7 |
| tetr/acrr family transcriptional regulator | D7004_10205 | Not Available | Negative | 2427635 - 2428240 | 23217.0 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | D7004_10210 | Not Available | Negative | 2428412 - 2430643 | 82285.1 |
| xanthine dehydrogenase family protein subunit m | D7004_10215 | Not Available | Negative | 2430640 - 2431638 | 36035.0 |
| (2fe-2s)-binding protein | D7004_10220 | Not Available | Negative | 2431631 - 2432131 | 17934.6 |
| alpha-amylase | D7004_10225 | Not Available | Negative | 2432760 - 2434601 | 70161.4 |
| hypothetical protein | D7004_10230 | Not Available | Negative | 2434619 - 2435983 | 51459.3 |
| ragb/susd family nutrient uptake outer membrane protein | D7004_10235 | Not Available | Negative | 2436048 - 2437517 | 54042.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

