Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type b 50s ribosomal protein l31 | D7004_00945 | Not Available | Negative | 213442 - 213690 | 9741.74 |
| amidase | D7004_00950 | Not Available | Positive | 214036 - 215658 | 57855.6 |
| hypothetical protein | D7004_00955 | Not Available | Negative | 215776 - 216051 | 10560.6 |
| methylmalonyl-coa epimerase | D7004_00960 | Not Available | Negative | 216593 - 217000 | 15207.3 |
| iscs subfamily cysteine desulfurase | D7004_00965 | Not Available | Positive | 217118 - 218329 | 44238.2 |
| fe-s cluster assembly scaffold iscu | D7004_00970 | Not Available | Positive | 218520 - 218933 | 14816.7 |
| iron-sulfur cluster assembly accessory protein | D7004_00975 | Not Available | Positive | 219017 - 219343 | 11874.9 |
| dna-binding response regulator | D7004_00980 | Not Available | Negative | 219372 - 220004 | 23521.2 |
| sensor histidine kinase | D7004_00985 | Not Available | Negative | 219994 - 221946 | 74556.2 |
| hypothetical protein | D7004_00990 | Not Available | Positive | 222187 - 222642 | 16033.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

