Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase family protein | D7004_09835 | Not Available | Positive | 2336430 - 2337419 | 37821.5 |
| asparagine--trna ligase | D7004_09840 | Not Available | Positive | 2337629 - 2339077 | 55400.1 |
| alpha-hydroxy-acid oxidizing protein | D7004_09845 | Not Available | Negative | 2339169 - 2340323 | 42675.8 |
| carbohydrate kinase | D7004_09850 | Not Available | Negative | 2340336 - 2341721 | 52217.3 |
| sugar isomerase | D7004_09855 | Not Available | Negative | 2341736 - 2343019 | 47338.4 |
| bifunctional aldolase/short-chain dehydrogenase | D7004_09860 | Not Available | Negative | 2343122 - 2345242 | 76613.4 |
| l-rhamnose/proton symporter rhat | D7004_09865 | Not Available | Negative | 2345271 - 2346362 | 39676.4 |
| gntr family transcriptional regulator | D7004_09870 | Not Available | Positive | 2346481 - 2347512 | 39295.8 |
| ribulokinase | D7004_09875 | Not Available | Positive | 2347762 - 2349462 | 62152.2 |
| l-ribulose-5-phosphate 4-epimerase | D7004_09880 | Not Available | Positive | 2349459 - 2350157 | 25727.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

