Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | D7004_00895 | Not Available | Positive | 202508 - 203302 | 30026.0 |
| diguanylate cyclase | D7004_00900 | Not Available | Positive | 203280 - 206279 | 114334.0 |
| smc-scp complex subunit scpb | D7004_00905 | Not Available | Positive | 206528 - 207094 | 21302.6 |
| hypothetical protein | D7004_00910 | Not Available | Positive | 207184 - 207372 | 7238.91 |
| gnat family n-acetyltransferase | D7004_00915 | Not Available | Positive | 207443 - 208561 | 43185.9 |
| xre family transcriptional regulator | D7004_00920 | Not Available | Negative | 208723 - 209043 | 11829.4 |
| peptidoglycan synthetase | D7004_00925 | Not Available | Negative | 209069 - 210421 | 50344.3 |
| 50s ribosomal protein l11 methyltransferase | D7004_00930 | Not Available | Negative | 210494 - 211345 | 32014.1 |
| triose-phosphate isomerase | D7004_00935 | Not Available | Negative | 211345 - 212106 | 27488.7 |
| glucose-1-phosphate thymidylyltransferase | D7004_00940 | Not Available | Negative | 212206 - 213369 | 43068.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

