Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium-transporting atpase subunit f | D7004_09430 | Not Available | Positive | 2248693 - 2248770 | 2960.98 |
| potassium-transporting atpase subunit kdpa | D7004_09435 | Not Available | Positive | 2248805 - 2250523 | 62248.8 |
| k(+)-transporting atpase subunit b | D7004_09440 | Not Available | Positive | 2250629 - 2252656 | 71828.6 |
| potassium-transporting atpase subunit kdpc | D7004_09445 | Not Available | Positive | 2252738 - 2253298 | 19873.4 |
| porin | D7004_09450 | Not Available | Positive | 2253548 - 2254618 | 39493.3 |
| sensor protein kdpd | D7004_09455 | Not Available | Positive | 2254812 - 2255930 | 42326.7 |
| pas domain-containing protein | D7004_09460 | Not Available | Positive | 2256194 - 2257942 | 65837.4 |
| pas domain-containing sensor histidine kinase | D7004_09465 | Not Available | Positive | 2258430 - 2260079 | 61785.7 |
| acyl-coa thioesterase | D7004_09470 | Not Available | Negative | 2260080 - 2260547 | 17432.4 |
| glycoside hydrolase family 97 protein | D7004_09475 | Not Available | Negative | 2260839 - 2262911 | 78135.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

