Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | D7004_09370 | Not Available | Negative | 2234716 - 2235570 | 30261.7 |
| nudix domain-containing protein | D7004_09375 | Not Available | Negative | 2235625 - 2236086 | 17382.8 |
| hypothetical protein | D7004_09385 | Not Available | Negative | 2236594 - 2236992 | 15595.2 |
| hypothetical protein | D7004_09390 | Not Available | Negative | 2237771 - 2237962 | 7039.22 |
| duf2911 domain-containing protein | D7004_09395 | Not Available | Negative | 2238461 - 2238979 | 18863.9 |
| sodium:solute symporter | D7004_09400 | Not Available | Negative | 2239021 - 2240709 | 62638.1 |
| pig-l family deacetylase | D7004_09405 | Not Available | Negative | 2240810 - 2243305 | 92459.4 |
| sigma-54-dependent fis family transcriptional regulator | D7004_09410 | Not Available | Positive | 2243536 - 2244873 | 49831.3 |
| m1 family peptidase | D7004_09415 | Not Available | Positive | 2244941 - 2246521 | 60149.7 |
| m20/m25/m40 family metallo-hydrolase | D7004_09425 | Not Available | Positive | 2247316 - 2248428 | 41594.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

